Evaluation of Missing Data and Imputation Methods in Environmental Mixtures Analyses using Weighted Quantile Sum regression and Quantile g-computation Restricted; Files Only
Grieco, Megan (Spring 2024)
Abstract
Background: Simultaneous exposure to multiple environmental chemicals poses challenges for traditional regression methods due to correlations among exposures and missing data issues. Weighted Quantile Sum (WQS) regression and Quantile g-computation (qgcomp) have emerged as valuable tools for analyzing mixtures of exposures. However, the impact of missing exposure data on these methods has received limited attention.
Methods: We conducted a comprehensive simulation study to assess the performance of various imputation methods for missing exposure data in WQS and qgcomp analyses. We varied sample size, number of exposures subject to missingness, and percent of missingness to. Additionally, we applied these methods to real-world data from the Atlanta African American Maternal-Child Cohort to assess robustness of findings.
Results: Tree-based Imputation methods such as missForest and missRanger demonstrate best performance and robustness, particularly in scenarios with missing data due to limit of detection (LOD). Our results show that qgcomp generally outperforms WQS in bias, standard error, and 95% CI coverage. Incorporating the outcome in imputation had mixed effects on performance, indicating the need for careful consideration in applied analyses. In the application, estimates of the joint effect on birthweight remained robust across imputation methods, while estimates on gestational age at birth were more varied.
Conclusions: Our findings underscore the importance of considering missing data in exposure analysis. We also provide insights into the performance of imputation methods in WQS and qgcomp analyses and offer guidance for enhancing the reliability of findings.
Table of Contents
1 Introduction: 1
2 Methods: 2
2.1 Simulation Study: 2
2.2 Application to the Atlanta African American Maternal-Child Cohort: 3
3 Results: 3
3.1 Simulation Studies: 3
3.1.1 Joint Mixture Effect: 3
3.2 Analysis of the Atlanta African American Maternal-Child Cohort: 4
4 Discussion: 5
5 References: 8
6 Figures and Tables: 11
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