
SRCDIR = lib
COREMOD  = $(addsuffix _tests,$(addprefix dimer.,archive data ops))
COREMOD += $(addsuffix _tests,$(addprefix dimer.genome.,genome bedops))
COREMOD += $(addsuffix _tests,$(addprefix dimer.nnet.,nnet autoencoder config_spec cspec monitor nccn nnet train))
OPTMOD = $(addsuffix _tests,$(addprefix dimer.nnet.cnninv.,cnninv gmodel predictions))


all : install


install : setup.py
	python $< install

docs :
	$(MAKE) -C apidoc/  html

test :
	nosetests $(COREMOD)

test_opt : 
	nosetests $(OPTMOD)

vtest :
	nosetests -v $(SRCDIR)

clean :
	rm -rf build dist dimer.egg-info
